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    Gene: AT4G16670

    Description

    auxin canalization protein (DUF828) [Source:NCBI gene (formerly Entrezgene);Acc:827369]

    Gene Synonyms

    DL4360W, FCAALL.2

    Location

    Chromosome 4: 9,385,119-9,387,754 forward strand.

    About this gene

    This gene has 3 transcripts (splice variants), 161 orthologues and 8 paralogues.

    Transcripts

    Show transcript tableHide transcript table

    Show/hide columns (1 hidden)
    • Name
    • Transcript ID
    • bp
    • Protein
    • Translation ID
    • Biotype
    • UniProt
    • RefSeq
    • Flags
    Download what you seeDownload whole table
    NameTranscript IDbpProteinBiotypeUniProtRefSeqFlags
    AT4G16670-203AT4G16670.11620429aa
     
    Protein coding
    		Q5HZ31 -Ensembl Canonical
    AT4G16670-202AT4G16670.31328380aa
     
    Protein coding
    		A0A1P8B5F2 --
    AT4G16670-201AT4G16670.21263351aa
     
    Protein coding
    		A0A1P8B5G5 --

    Gene gain/loss tree

    Info

    This gene family has significant gene gain or loss events (p-value for the gene family is 0, as computed by CAFE). Click the tree nodes or the icons on the image blue bar to interact with the tree.

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    000Chondrus crispus00Galdieria sulphuraria0Cyanidioschyzon merolae000Chlamydomonas reinhardtii0Ostreococcus lucimarinus101Marchantia polymorpha1Physcomitrium patens004Amborella trichopoda6Nymphaea colorata06Papaver somniferum4Asparagus officinalis0000016Eragrostis curvula16Eragrostis tef0007Setaria italica7Setaria viridis24Echinochloa crus-galli16Digitaria exilis9Panicum hallii HAL208Sorghum bicolor10Zea mays03Saccharum spontaneum (component A)7Saccharum spontaneum (component D)3Saccharum spontaneum (component B)4Saccharum spontaneum (component C)008Brachypodium distachyon008Avena sativa Sang (component D)9Avena sativa OT30980Avena sativa Sang (component U)9Avena sativa Sang (component C)8Avena sativa Sang (component A)9Lolium perenne0010Secale cereale9Hordeum vulgare08Aegilops umbellulata00Triticum aestivum (component U)0Triticum turgidum (component U)08Triticum aestivum (component B)8Triticum turgidum (component B)10Triticum timopheevii (component B)7Triticum spelta (component B)6Triticum dicoccoides (component B)010Triticum aestivum (component A)8Triticum turgidum (component A)10Triticum timopheevii (component A)5Triticum urartu10Triticum spelta (component A)9Triticum dicoccoides (component A)8Triticum aestivum (component D)8Triticum spelta (component D)8Aegilops tauschii007Oryza longistaminata5Oryza rufipogon08Oryza sativa Indica Group8Oryza sativa Japonica Group9Oryza brachyantha7Oryza nivara7Oryza punctata8Oryza glaberrima8Oryza glumipatula5Oryza meridionalis6Oryza barthii8Leersia perrieri7Ananas comosus13Musa acuminata9Dioscorea rotundata08Kalanchoe fedtschenkoi0007Helianthus annuus5Lactuca sativa6Cynara cardunculus2Daucus carota0006Capsicum annuum06Solanum lycopersicum6Solanum tuberosum6Nicotiana attenuata9Ipomoea triloba06Sesamum indicum09Fraxinus excelsior13Olea europaea6Coffea canephora10Actinidia chinensis06Vitis vinifera0006Quercus suber6Quercus lobata3Corylus avellana12Juglans regia08Populus trichocarpa9Manihot esculenta05Cannabis sativa female5Ficus carica05Rosa chinensis010Malus domestica Golden06Prunus dulcis5Prunus persica5Prunus avium06Citrullus lanatus06Cucumis melo6Cucumis sativus024Arachis hypogaea9Lupinus angustifolius008Cajanus cajan (pigeon pea) - GCA_000340665.18Phaseolus vulgaris08Vigna angularis8Vigna radiata8Vigna unguiculata8Lablab purpureus Natoba8Sphenostylis stenocarpa016Glycine max16Glycine soja (Wild soybean)008Medicago truncatula8Trifolium pratense09Lathyrus sativus07Pisum sativum7Pisum sativum Garden pea7Pisum sativum JI282210Vicia faba005Theobroma cacao Matina 1-69Gossypium raimondii3Corchorus capsularis0027Brassica juncea24Brassica napus13Brassica oleracea14Brassica rapa R-o-189Arabis alpina9Eutrema salsugineum009Arabidopsis thaliana9Arabidopsis halleri9Arabidopsis lyrata09Camelina sativa (component G1)10Camelina sativa (component G3)11Camelina sativa (component G2)08Pistacia vera5Citrus clementina05Eucalyptus grandis5Corymbia citriodora05Beta vulgaris8Chenopodium quinoa4Selaginella moellendorffii1Chara braunii0000Human0C.savignyi00Caenorhabditis elegans (Nematode, N2)0Drosophila melanogaster - (Fruit fly)0Saccharomyces cerevisiae
    LEGENDNo significant changeSignificant ExpansionSignificant ContractionNNumber of MembersNodes with 0 membersNumber of members127SpeciesSpecies with no genesSpeciesQueried species

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