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    Gene: AT4G40030

    Description

    Histone superfamily protein [Source:NCBI gene (formerly Entrezgene);Acc:830164]

    Gene Synonyms

    H3.3, histone 3.3, T5J17.200, T5J17_200

    Location

    Chromosome 4: 18,555,532-18,557,106 reverse strand.

    About this gene

    This gene has 4 transcripts (splice variants), 206 orthologues and 13 paralogues.

    Transcripts

    Show transcript tableHide transcript table

    Show/hide columns (1 hidden)
    • Name
    • Transcript ID
    • bp
    • Protein
    • Translation ID
    • Biotype
    • UniProt
    • RefSeq
    • Flags
    Download what you seeDownload whole table
    NameTranscript IDbpProteinBiotypeUniProtRefSeqFlags
    AT4G40030-202AT4G40030.2794164aa
     
    Protein coding
    		A0A654FX83 A8MRL0 -Ensembl Canonical
    AT4G40030-203AT4G40030.41036136aa
     
    Protein coding
    		A0A384KRT1 B9DGR9 P59169
    		--
    AT4G40030-204AT4G40030.31031136aa
     
    Protein coding
    		A0A384KRT1 B9DGR9 P59169
    		--
    AT4G40030-201AT4G40030.1945136aa
     
    Protein coding
    		A0A384KRT1 B9DGR9 P59169
    		--

    Gene gain/loss tree

    Info

    This gene family has significant gene gain or loss events (p-value for the gene family is 0, as computed by CAFE). Click the tree nodes or the icons on the image blue bar to interact with the tree.

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    104Chondrus crispus02Galdieria sulphuraria2Cyanidioschyzon merolae0035Chlamydomonas reinhardtii4Ostreococcus lucimarinus0010Marchantia polymorpha16Physcomitrium patens004Amborella trichopoda4Nymphaea colorata013Papaver somniferum4Asparagus officinalis0000016Eragrostis curvula20Eragrostis tef0008Setaria italica8Setaria viridis25Echinochloa crus-galli18Digitaria exilis5Panicum hallii HAL207Sorghum bicolor6Zea mays03Saccharum spontaneum (component B)6Saccharum spontaneum (component D)5Saccharum spontaneum (component C)3Saccharum spontaneum (component A)009Brachypodium distachyon005Avena sativa Sang (component C)6Avena sativa OT30982Avena sativa Sang (component U)11Avena sativa Sang (component D)11Avena sativa Sang (component A)15Lolium perenne0018Secale cereale13Hordeum vulgare014Aegilops umbellulata02Triticum aestivum (component U)1Triticum turgidum (component U)015Triticum aestivum (component B)18Triticum turgidum (component B)27Triticum timopheevii (component B)14Triticum spelta (component B)13Triticum dicoccoides (component B)017Triticum aestivum (component A)19Triticum turgidum (component A)24Triticum timopheevii (component A)13Triticum urartu18Triticum spelta (component A)16Triticum dicoccoides (component A)12Triticum aestivum (component D)14Triticum spelta (component D)11Aegilops tauschii004Oryza longistaminata5Oryza rufipogon06Oryza sativa Indica Group5Oryza sativa Japonica Group5Oryza brachyantha4Oryza nivara5Oryza punctata5Oryza glaberrima6Oryza glumipatula4Oryza meridionalis7Oryza barthii4Leersia perrieri6Ananas comosus9Musa acuminata4Dioscorea rotundata014Kalanchoe fedtschenkoi00016Helianthus annuus7Lactuca sativa6Cynara cardunculus3Daucus carota0005Capsicum annuum06Solanum lycopersicum6Solanum tuberosum4Nicotiana attenuata4Ipomoea triloba03Sesamum indicum011Fraxinus excelsior7Olea europaea5Coffea canephora10Actinidia chinensis04Vitis vinifera0004Quercus suber4Quercus lobata8Corylus avellana5Juglans regia07Populus trichocarpa4Manihot esculenta02Cannabis sativa female3Ficus carica012Rosa chinensis08Malus domestica Golden04Prunus dulcis5Prunus persica3Prunus avium03Citrullus lanatus02Cucumis melo3Cucumis sativus013Arachis hypogaea11Lupinus angustifolius005Cajanus cajan (pigeon pea) - GCA_000340665.14Phaseolus vulgaris03Vigna angularis3Vigna radiata5Vigna unguiculata3Lablab purpureus Natoba4Sphenostylis stenocarpa07Glycine max7Glycine soja (Wild soybean)0012Medicago truncatula8Trifolium pratense08Lathyrus sativus07Pisum sativum7Pisum sativum JI28226Pisum sativum Garden pea8Vicia faba004Theobroma cacao Matina 1-65Gossypium raimondii4Corchorus capsularis008Brassica juncea14Brassica napus7Brassica oleracea6Brassica rapa R-o-184Arabis alpina5Eutrema salsugineum008Arabidopsis thaliana11Arabidopsis halleri10Arabidopsis lyrata08Camelina sativa (component G3)6Camelina sativa (component G2)8Camelina sativa (component G1)06Pistacia vera3Citrus clementina03Eucalyptus grandis3Corymbia citriodora04Beta vulgaris10Chenopodium quinoa6Selaginella moellendorffii6Chara braunii5182021Human21C.savignyi2222Caenorhabditis elegans (Nematode, N2)25Drosophila melanogaster - (Fruit fly)3Saccharomyces cerevisiae
    LEGENDNo significant changeSignificant ExpansionSignificant ContractionNNumber of MembersNodes with 0 membersNumber of members135SpeciesSpecies with no genesSpeciesQueried species

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