Gene: AT2G40640

Description

RING/U-box superfamily protein [Source:NCBI gene (formerly Entrezgene);Acc:818659]

Gene Synonyms

T7D17.18, T7D17_18

Location

Chromosome 2: 16,960,964-16,963,215 reverse strand.

About this gene

This gene has 9 transcripts (splice variants), 150 orthologues and 1 paralogue.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Biotype	UniProt	RefSeq	Flags
AT2G40640-204	AT2G40640.1	1528	383aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q58FY4	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
AT2G40640-206	AT2G40640.4	1786	294aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A1P8AY69	-	-
AT2G40640-203	AT2G40640.5	1714	294aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A1P8AY69	-	-
AT2G40640-205	AT2G40640.6	1697	322aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A1P8AY93	-	-
AT2G40640-201	AT2G40640.8	1693	294aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A1P8AY69	-	-
AT2G40640-207	AT2G40640.7	1693	320aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A1P8AY41	-	-
AT2G40640-208	AT2G40640.9	1621	294aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A1P8AY69	-	-
AT2G40640-202	AT2G40640.3	1604	322aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2H1ZE42	-	-
AT2G40640-209	AT2G40640.2	1600	352aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-	-

Marked-up sequence

Download sequence BLAST this sequence

Exons

AT2G40640 exons
All exons in this region

Variants

Markup

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>chromosome:TAIR10:2:16960364:16963815:-1
AGAGATAGAGAACGAGACAGAAGAGACAGGGCAAGGCGCAGAAGTAGAAGCAGGAGTAGG
GATCGTAAGAGACATGAAACTGATGATGTGCGGGATCGGGAAGAACCTAAGAAAAAGAAA
GAAAAGAAGGAGAAGATGAAGGAAGATGGAACCGATCATCCAAATCCTGAAATTGCAGAG
ATGAATAGACTGAGAGCATCACTGGGAATGAAACCCCTCAGGGACTGAACTGTGAAATGA
GGACATCTTTATCAAACCGAAACTTGGTTCATTTGCCCAGCTAAACCGGTTACTACACTG
TGATCCTACTCACTATAGTTTTGGTTTTTTTGAGTTTACCTGATCCCTCTTTAATGTAGA
ACAAAATGGAGAATCTGTAATGGCATTGTACTGTATGTTCTCTAAACCGTAAACGAATTG
TGGTCGAGAAATTCTGAATGTAACCCGGTTCTTGATATTAGTTGTTTTTAAGGTAATTCA
GATAAATATAAAAACCTATATGTTATGTCTACGTGGCGATATCACTTTATGAGTCCATGT
AAATCGGACCCACCAAAAGCTTATAGGTAAATGATACGGTTTCATAATCATTAACCATCA
CGACGCGCGTGCTACTCATGTCCCACTTACGACGACGTCGTTTTAAACTCTCTCTCTGTG
CTCTTCCAGTCTCTATCGATCGCCTTCTGAATTTTCCGGCGGAAAAGCAAATGTCCGTTA
ACGACAGTATCGATCCTCGGTTCGTATTCCACGTTGAAGATGAATCTTTGCGTTTCCGTG
TGGGAGATTCAGGTACTAAGATCCGGGAGCTCGAAACCGTCGGCGATCGCCATTTCAGAA
CCCAGCAAGGTTTCTGCGGAAATAGAATTGAGAAAGATGAAACCATGTATTCCGATGGAG
ATGATGAAGAGTACGACGTTTCTATCCGAAGACGAACTGCTCTGATTCAGCCTGGTATTG
ATTCCGGTAACAATTATGATTCTGCTGCAGCTGAAGAAACCAACAGAGAAAGTAAAAATC
CAGGTATAATAATACTCTACATTACTTCTTTCACGACTACCGGAGATTCCAAGATTGTTG
AAGCTAACGAAAAATTCTTTGGTTTTACTTAAGCTCAGTTGGTTGGGAACTGGTTGTGAG
AGAAGATGGGGAAGGTAATTCAACGATTGATCGACATGAAATGGAGTTTAAGGTGAGGAT
CACTAAACCAGATGGTAACGTATCTAATTCCCACCGTAACACGCAACAAAAGCGAGATTT
TGCTTCTGTGGAGAAGGAGAGAGTCACTACTACTAGTGTCAGCTCTTGGGAGTCTCTCAA
GGCCATCCTCTCTGATCCTGTCACGTAAGTTTGTTAAGTCTGCTTGTCAATGGTCAGGGA
ATTTGATAACTAAGATCAGTTTAATTTTTGAATCTGAGTCAATGTCAATGTAACCTTGAT
GATTATTGTTGTGTGATGGAAAGTGTATCGTCTAGAAGGCTAATTCTTGTTAACATTCAT
AGAGATGATTTTTCTTTTCTGTTACTTTGGTTTGGATAGCGGAGCCTTGATGAATGATGC
TACCATACTGCCTTGTGGACATTCTTTTGGCGCCGGGGGATTAAAAGAAGTTAAAAAAAT
GGTATATGACTGACTCTTAACCAGTCCATTTAATAAGGGTCTTCTTGCTTTTGTCTCATG
TGAATCTTAATAATCTGAGTTTTGGTAATTTTTGTTGTTAGAAAGCATGTTTCACATGTT
CCCAACCTACTTTAGAAGGATCAGAAAAGCCAAATCTCTGTGAGTTTCACGGCATTACTA
GTTTCAGAGAAAGACTTCTATTCTTCTTCCTGATCAAGTTTATTGGCTTGTTCAGCTCTC
AGAATTGTAGTTCATGCTTTCCGCCAAGAAGAAGATTCAGATCATATTCACACGCTGAAA
AGAAGGAAAGAAAGGTCGGATCAGGTTTGTTTTTCCAATACACAGTAATCATGTGAGATT
ACATTAACAGTGAGAAATCAGATAAGCAGAGTTTCTTTCTTATGAATCTTGCTGCAGAAG
AGAAGTTTCTGTATCCCAAACATCACTGAAACTCCTAAGAGTAGCCGAGGCATACAGTTT
CCTTTCTCCATTGGAGATCATATTATCATAGAGGTCTGAGATATTCATGCATACCAATGT
TACTTCATACATTCTAGGGAATACTACTTTCATGTTTTAACAGACAAAAAGTTCCTTATG
GCTTAGGGAAACAAAAGGACGCCTCCAAGGTTTGTCGGACGCATAGCTGTTATAATGACA
CAATGCTTAAATGGATGGTTAAGTCTCGTTGCCTCATTTCATCCATAGATGCTGAAGCTC
TTATAACAAAATTGGATATATGTTCCCAGGTACGTTGTGAAGACAGTGGACAATTCAGAG
TCTATCAAGTTACAACATTGCTCACTTGCCAAGATTTCAGACAATTCATCTACGAAGGTA
ACAGTAGCTGAAATGCCACCGTCTTGGCTCTAACTCGTAGAAAGCAAATATCTGTGGCTG
CAGAAATCAGCATCTGTAATTTTTTCATTCAGAGAAAGTAGTTACTACGTTTCATTATGT
AATATAGGAACGAGACAACAATTTTCTGTACTAAATCCAGTGTTTTCATTCATACAAGGA
AACTTTGCTCATCTAAAAGGACATGCGTATTGAAACAAATGCCAACTTTGTAGCTTTGAT
ATAAAAAGAAAAAAGGTCGCTTCTAATGTTACATACACGAATGACAAACTGATCAATCGC
CTGTTATTTACACTAAAGATAATAACCATCAAAAAAGTGCTAACATAAAGACAACATATA
GGCGGTGTGATTAGTCAGAAATTCGGTTAACCAAAAAAAAAAAAAAAACAAGATTAAGAA
CCGGTAGGCGGCGGCTTCATCATTGACAGAAGAAAACTGCAGGTTGAAAAAATAGAAGCT
GCAGCCGCCTGAACCGCCATACTAGTCTCCTGATTACCGTCTTTCCCAAAACTGCAAGTG
TATTGTACAACAAGAAAATCATTTAGACCAGTCTTTTTCTATGCTTCTATGGACTGCTTC
GTCTATACCTTGAATCGGATGATTGGGAACTAAAAGGCGAGTACTCTTCCATTTGTCGTA
GACCATGGTTACATCGTGACTGCATTTCCTTCACTTGGTTTAGCGAACGTTCCTGCAAAT
TTCAAATCCATAGTATCAAACATCAGACCCTAAGCTTAAAAGACCATGTCGCTATAATCA
TTTTAACTCAAAGGCAGTGGATATTTACGCACCAAATCTCTCTGTTCATCATACAGAGCT
TTATTTATCTGATCAAATTTTGCAGTCCACCTCTTCTGATGTGTCTCGGTTGCTGCTTTA
TCGGACGAAGCATCACCAGAGGTATTCGTAGTCACCATCTCAAGAGAATTTGCTTGGTTA
GAAGAAGATTCCCTTGATGAAGCGAGAAGCGG

Gene: AT2G40640

Marked-up sequence

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Gene: AT2G40640

Marked-up sequence

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