Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Gene families
Literature
Plant Compara
Pan-taxonomic Compara
- Gene Tree
- Orthologues
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Ensembl Plants is produced in collaboration with Gramene

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Gene: AT3G05500

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Description

Rubber elongation factor protein (REF) [Source:NCBI gene (formerly Entrezgene);Acc:819715]

Gene Synonyms

F22F7.5, F22F7_5

Location

Chromosome 3: 1,593,182-1,595,099 forward strand.

About this gene

This gene has 2 transcripts (splice variants), 142 orthologues and 1 paralogue.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Biotype	UniProt	RefSeq	Flags
AT3G05500-201	AT3G05500.1	1396	246aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A178VB80 Q9MA63	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
AT3G05500-202	AT3G05500.2	873	174aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A1I9LN84	-	-

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Pan-taxonomic Compara

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Genomic alignments (Not available)

Gene tree

Orthologues

Families (Not available)

More views of comparative genomics data, such as multiple alignments and synteny, are available on the Location page for this gene.

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Personal Data