Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Gene families
Literature
Plant Compara
Pan-taxonomic Compara
- Gene Tree
- Orthologues
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Ensembl Plants is produced in collaboration with Gramene

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Gene: AT3G48710

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Description

DEK domain-containing chromatin associated protein [Source:NCBI gene (formerly Entrezgene);Acc:824032]

Location

Chromosome 3: 18,040,675-18,044,368 forward strand.

About this gene

This gene has 1 transcript (splice variant), 160 orthologues and 3 paralogues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Biotype	UniProt	RefSeq	Flags
AT3G48710-201	AT3G48710.1	2111	462aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A384L6D6 Q9SMM8	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,

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Literature

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Showing the top 4 hits from Europe PubMed Central

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PubMed ID	Title	Authors	Journal
33875598	Transcriptional profiling reveals signatures of latent developmental potential in Arabidopsis stomatal lineage ground cells.	Ho CK, Bringmann M, Oshima Y, Mitsuda N, Bergmann DC.	Proc Natl Acad Sci U S A 118 (17) 2021
34249042	Heat Stress-Dependent Association of Membrane Trafficking Proteins With mRNPs Is Selective.	Wolff H, Jakoby M, Stephan L, Koebke E, Hülskamp M.	Front Plant Sci 12 2021
18478122	EST analysis of Ostreococcus lucimarinus, the most compact eukaryotic genome, shows an excess of introns in highly expressed genes.	Lanier W, Moustafa A, Bhattacharya D, Comeron JM.	PLoS One 3 (5) 2008
15496452	Proteomic analysis of the Arabidopsis nucleolus suggests novel nucleolar functions.	Pendle AF, Clark GP, Boon R, Lewandowska D, Lam YW, Andersen J, Mann M, Lamond AI, Brown JW, Shaw PJ.	Mol Biol Cell 16 (1) 2005

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