Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Gene families
Literature
Plant Compara
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
Pan-taxonomic Compara
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- Orthologues
Ontologies
- GO: Anatomical entity
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Molecular interactions
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Ensembl Plants is produced in collaboration with Gramene

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Gene: AT3G26730

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Description

RING/U-box superfamily protein [Source:NCBI gene (formerly Entrezgene);Acc:822285]

Location

Chromosome 3: 9,823,524-9,827,547 forward strand.

About this gene

This gene has 8 transcripts (splice variants) and 145 orthologues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Biotype	UniProt	RefSeq	Flags
AT3G26730-201	AT3G26730.1	2762	772aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9LSE3	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
AT3G26730-202	AT3G26730.2	3056	622aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A1I9LNI9	-	-
AT3G26730-205	AT3G26730.3	3045	628aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A1I9LNI8	-	-
AT3G26730-208	AT3G26730.4	2988	622aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A1I9LNI9	-	-
AT3G26730-203	AT3G26730.5	2977	628aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A1I9LNI8	-	-
AT3G26730-207	AT3G26730.6	2962	628aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A1I9LNI8	-	-
AT3G26730-204	AT3G26730.7	2894	628aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A1I9LNI8	-	-
AT3G26730-206	AT3G26730.8	2797	729aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A1I9LNJ3	-	-

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Literature

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Showing the top 8 hits from Europe PubMed Central

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PubMed ID	Title	Authors	Journal
34740825	The Circadian Clock Gene Circuit Controls Protein and Phosphoprotein Rhythms in Arabidopsis thaliana.	Krahmer J, Hindle M, Perby LK, Mogensen HK, Nielsen TH, Halliday KJ, van Ooijen G, Le Bihan T, Millar AJ.	Mol Cell Proteomics 21 (1) 2022
29073083	Natural variation identifies genes affecting drought-induced abscisic acid accumulation in Arabidopsis thaliana.	Kalladan R, Lasky JR, Chang TZ, Sharma S, Juenger TE, Verslues PE.	Proc Natl Acad Sci U S A 114 (43) 2017
35592555	The Carotenoid Esterification Gene BrPYP Controls Pale-Yellow Petal Color in Flowering Chinese Cabbage (Brassica rapa L. subsp. parachinensis).	Li P, Lv S, Zhang D, Su T, Xin X, Wang W, Zhao X, Yu Y, Zhang Y, Yu S, Zhang F.	Front Plant Sci 13 2022
32303634	The circadian clock shapes the <i>Arabidopsi</i>s transcriptome by regulating alternative splicing and alternative polyadenylation.	Yang Y, Li Y, Sancar A, Oztas O.	J Biol Chem 295 (22) 2020
34884660	Data-Independent Acquisition-Based Proteome and Phosphoproteome Profiling Reveals Early Protein Phosphorylation and Dephosphorylation Events in Arabidopsis Seedlings upon Cold Exposure.	Tan J, Zhou Z, Feng H, Xing J, Niu Y, Deng Z.	Int J Mol Sci 22 (23) 2021
34654884	Genome sequencing of turmeric provides evolutionary insights into its medicinal properties.	Chakraborty A, Mahajan S, Jaiswal SK, Sharma VK.	Commun Biol 4 (1) 2021
26674968	A Role for Arabidopsis miR399f in Salt, Drought, and ABA Signaling.	Baek D, Chun HJ, Kang S, Shin G, Park SJ, Hong H, Kim C, Kim DH, Lee SY, Kim MC, Yun DJ.	Mol Cells 39 (2) 2016
11983057	Evaluation and classification of RING-finger domains encoded by the Arabidopsis genome.	Kosarev P, Mayer KF, Hardtke CS.	Genome Biol 3 (4) 2002

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