Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Gene families
Literature
Plant Compara
Pan-taxonomic Compara
- Gene Tree
- Orthologues
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Ensembl Plants is produced in collaboration with Gramene

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Gene: AT3G23090

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Description

TPX2 (targeting protein for Xklp2) protein family [Source:NCBI gene (formerly Entrezgene);Acc:821884]

Gene Synonyms

WDL3

Location

Chromosome 3: 8,214,289-8,217,206 reverse strand.

About this gene

This gene has 5 transcripts (splice variants), 208 orthologues and 8 paralogues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Biotype	UniProt	RefSeq	Flags
AT3G23090-201	AT3G23090.3	1496	378aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A1I9LQY2	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
AT3G23090-202	AT3G23090.4	1484	374aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A1I9LQY3	-	-
AT3G23090-204	AT3G23090.2	1372	342aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F4J2V3	-	-
AT3G23090-203	AT3G23090.1	1353	338aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A654FB52 Q84WL6	-	-
AT3G23090-205	AT3G23090.5	1325	339aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A1I9LQY4	-	-

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Literature

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Showing the top 7 hits from Europe PubMed Central

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PubMed ID	Title	Authors	Journal
28253318	Transgenic expression of fungal accessory hemicellulases in Arabidopsis thaliana triggers transcriptional patterns related to biotic stress and defense response.	Tsai AY, Chan K, Ho CY, Canam T, Capron R, Master ER, Bräutigam K.	PLoS One 12 (3) 2017
37775748	Interaction between phenylpropane metabolism and oil accumulation in the developing seed of Brassica napus revealed by high temporal-resolution transcriptomes.	Yu L, Liu D, Yin F, Yu P, Lu S, Zhang Y, Zhao H, Lu C, Yao X, Dai C, Yang QY, Guo L.	BMC Biol 21 (1) 2023
33846350	The E3 ligase MREL57 modulates microtubule stability and stomatal closure in response to ABA.	Dou L, He K, Peng J, Wang X, Mao T.	Nat Commun 12 (1) 2021
33130902	A guide to plant TPX2-like and WAVE-DAMPENED2-like proteins.	Smertenko A, Clare SJ, Effertz K, Parish A, Ross A, Schmidt S.	J Exp Bot 72 (4) 2021
33841486	Illuminating the COP1/SPA Ubiquitin Ligase: Fresh Insights Into Its Structure and Functions During Plant Photomorphogenesis.	Ponnu J, Hoecker U.	Front Plant Sci 12 2021
29312402	Biology in the Dry Seed: Transcriptome Changes Associated with Dry Seed Dormancy and Dormancy Loss in the Arabidopsis GA-Insensitive sleepy1-2 Mutant.	Nelson SK, Ariizumi T, Steber CM.	Front Plant Sci 8 2017
24682084	Arabidopsis transcriptome analysis reveals key roles of melatonin in plant defense systems.	Weeda S, Zhang N, Zhao X, Ndip G, Guo Y, Buck GA, Fu C, Ren S.	PLoS One 9 (3) 2014

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