Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Gene families
Literature
Plant Compara
Pan-taxonomic Compara
- Gene Tree
- Orthologues
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Ensembl Plants is produced in collaboration with Gramene

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Gene: AT3G21100

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Description

RNA-binding (RRM/RBD/RNP motifs) family protein [Source:NCBI gene (formerly Entrezgene);Acc:821662]

Location

Chromosome 3: 7,398,959-7,402,525 forward strand.

About this gene

This gene has 4 transcripts (splice variants), 114 orthologues and 7 paralogues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Biotype	UniProt	RefSeq	Flags
AT3G21100-203	AT3G21100.3	2367	603aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A1I9LQK5	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
AT3G21100-202	AT3G21100.2	2502	602aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F4IWD6	-	-
AT3G21100-201	AT3G21100.1	2487	602aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F4IWD6	-	-
AT3G21100-204	AT3G21100.4	2352	603aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A1I9LQK5	-	-

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Literature

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Showing the top 1 hits from Europe PubMed Central

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PubMed ID	Title	Authors	Journal
30297453	PRP4KA, a Putative Spliceosomal Protein Kinase, Is Important for Alternative Splicing and Development in Arabidopsis thaliana.	Kanno T, Venhuizen P, Wen TN, Lin WD, Chiou P, Kalyna M, Matzke AJM, Matzke M.	Genetics 210 (4) 2018

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