Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Gene families
Literature
Plant Compara
Pan-taxonomic Compara
- Gene Tree
- Orthologues
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Ensembl Plants is produced in collaboration with Gramene

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Gene: AT1G54790

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Description

GDSL-like Lipase/Acylhydrolase superfamily protein [Source:NCBI gene (formerly Entrezgene);Acc:841920]

Gene Synonyms

T22H22.20, T22H22_20

Location

Chromosome 1: 20,440,979-20,444,066 reverse strand.

About this gene

This gene has 3 transcripts (splice variants), 86 orthologues and 109 paralogues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Biotype	UniProt	RefSeq	Flags
AT1G54790-202	AT1G54790.2	1328	408aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q3ECP6	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
AT1G54790-201	AT1G54790.3	1526	383aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A178W6D8 F4HYK6	-	-
AT1G54790-203	AT1G54790.1	1287	382aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A178W8D3	-	-

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Literature

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Showing the top 9 hits from Europe PubMed Central

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PubMed ID	Title	Authors	Journal
41020811	Distinct Transcriptomic Profile Underlying High CO<sub>2</sub> and Ethylene-Induced Deastringency in 'Daebong' Persimmon Fruit.	Baek MW, Chang SM, Park D, Tilahun S, Jeong CS.	Curr Issues Mol Biol 47 (9) 2025
28253318	Transgenic expression of fungal accessory hemicellulases in Arabidopsis thaliana triggers transcriptional patterns related to biotic stress and defense response.	Tsai AY, Chan K, Ho CY, Canam T, Capron R, Master ER, Bräutigam K.	PLoS One 12 (3) 2017
24739361	ARACNe-based inference, using curated microarray data, of Arabidopsis thaliana root transcriptional regulatory networks.	Chávez Montes RA, Coello G, González-Aguilera KL, Marsch-Martínez N, de Folter S, Alvarez-Buylla ER.	BMC Plant Biol 14 2014
36498863	Genetic Determinants of Fiber-Associated Traits in Flax Identified by Omics Data Integration.	Kanapin A, Rozhmina T, Bankin M, Surkova S, Duk M, Osyagina E, Samsonova M.	Int J Mol Sci 23 (23) 2022
31799778	Overexpression of a developing xylem cDNA library in transgenic poplar generates high mutation rate specific to wood formation.	Rauschendorfer J, Yordanov Y, Dobrev P, Vankova R, Sykes R, Külheim C, Busov V.	Plant Biotechnol J 18 (6) 2020
27423334	Elucidation of the genetic basis of variation for stem strength characteristics in bread wheat by Associative Transcriptomics.	Miller CN, Harper AL, Trick M, Werner P, Waldron K, Bancroft I.	BMC Genomics 17 2016
28018404	Functional and Integrative Analysis of the Proteomic Profile of Radish Root under Pb Exposure.	Wang Y, Xu L, Tang M, Jiang H, Chen W, Zhang W, Wang R, Liu L.	Front Plant Sci 7 2016
30753410	Genetic analysis of tomato root colonization by arbuscular mycorrhizal fungi.	Plouznikoff K, Asins MJ, de Boulois HD, Carbonell EA, Declerck S.	Ann Bot 124 (6) 2019
23781226	Identification of novel transcription factors regulating secondary cell wall formation in Arabidopsis.	Cassan-Wang H, Goué N, Saidi MN, Legay S, Sivadon P, Goffner D, Grima-Pettenati J.	Front Plant Sci 4 2013

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