Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Gene families
Literature
Plant Compara
Pan-taxonomic Compara
- Gene Tree
- Orthologues
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Ensembl Plants is produced in collaboration with Gramene

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Gene: AT1G12320

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Description

ankyrin repeat/KH domain protein (DUF1442) [Source:NCBI gene (formerly Entrezgene);Acc:837786]

Gene Synonyms

F5O11.5, F5O11_5

Location

Chromosome 1: 4,186,624-4,190,342 forward strand.

About this gene

This gene has 1 transcript (splice variant), 146 orthologues and 3 paralogues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Biotype	UniProt	RefSeq	Flags
AT1G12320-201	AT1G12320.1	3572	212aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A178WGP8 Q9LNB3	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,

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Literature

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Showing the top 3 hits from Europe PubMed Central

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PubMed ID	Title	Authors	Journal
37526283	JGI Plant Gene Atlas: an updateable transcriptome resource to improve functional gene descriptions across the plant kingdom.	Sreedasyam A, Plott C, Hossain MS, Lovell JT, Grimwood J, Jenkins JW, Daum C, Barry K, Carlson J, Shu S, Phillips J, Amirebrahimi M, Zane M, Wang M, Goodstein D, Haas FB, Hiss M, Perroud PF, Jawdy SS, Yang Y, Hu R, Johnson J, Kropat J, Gallaher SD, Lipzen A, Shakirov EV, Weng X, Torres-Jerez I, Weers B, Conde D, Pappas MR, Liu L, Muchlinski A, Jiang H, Shyu C, Huang P, Sebastian J, Laiben C, Medlin A, Carey S, Carrell AA, Chen JG, Perales M, Swaminathan K, Allona I, Grattapaglia D, Cooper EA, Tholl D, Vogel JP, Weston DJ, Yang X, Brutnell TP, Kellogg EA, Baxter I, Udvardi M, Tang Y, Mockler TC, Juenger TE, Mullet J, Rensing SA, Tuskan GA, Merchant SS, Stacey G, Schmutz J.	Nucleic Acids Res 51 (16) 2023
35921359	Endophytic bacterium Bacillus aryabhattai induces novel transcriptomic changes to stimulate plant growth.	Xu H, Gao J, Portieles R, Du L, Gao X, Borras-Hidalgo O.	PLoS One 17 (8) 2022
21589905	Misregulation of AUXIN RESPONSE FACTOR 8 underlies the developmental abnormalities caused by three distinct viral silencing suppressors in Arabidopsis.	Jay F, Wang Y, Yu A, Taconnat L, Pelletier S, Colot V, Renou JP, Voinnet O.	PLoS Pathog 7 (5) 2011

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