Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Gene families
Literature
Plant Compara
Pan-taxonomic Compara
- Gene Tree
- Orthologues
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Ensembl Plants is produced in collaboration with Gramene

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Gene: TRN1 AT2G16950

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Description

transportin 1 [Source:NCBI gene (formerly Entrezgene);Acc:816198]

Gene Synonyms

ATTRN1, F12A24.13, F12A24_13, TRANSPORTIN 1

Location

Chromosome 2: 7,353,773-7,361,256 forward strand.

About this gene

This gene has 2 transcripts (splice variants), 206 orthologues and 5 paralogues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
TRN1-202	AT2G16950.1	3345	895aa	AT2G16950.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
TRN1-201	AT2G16950.2	3461	891aa	AT2G16950.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A654EYI8 Q8H0U4	-	-

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Molecular interactions

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This species

Species	Gene ID	Interactor	Identifier
Arabidopsis thaliana	AT2G16950	protein	uniprot:Q8H0U4

Interacts with Show metadata

Species	Gene ID	Interactor	Identifier	Source DB
Saccharomyces cerevisiae S288c	YGL122C	protein	uniprot:P32505	HPIDB/(IntAct curated)

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Personal Data