Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Gene families
Literature
Plant Compara
Pan-taxonomic Compara
- Gene Tree
- Orthologues
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

Configure this page

Share this page

Bookmark this page

Ensembl Plants is produced in collaboration with Gramene

.

Gene: HDA15 AT3G18520

.

Description

histone deacetylase 15 [Source:NCBI gene (formerly Entrezgene);Acc:821382]

Gene Synonyms

ATHDA15, histone deacetylase 15

Location

Chromosome 3: 6,361,159-6,365,705 forward strand.

About this gene

This gene has 4 transcripts (splice variants), 161 orthologues and 12 paralogues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Biotype	UniProt	RefSeq	Flags
HDA15-202	AT3G18520.2	2082	564aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F4J8S1	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
HDA15-203	AT3G18520.3	2298	451aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A1I9LNM9	-	-
HDA15-204	AT3G18520.4	2215	518aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A1I9LNM8	-	-
HDA15-201	AT3G18520.1	2185	552aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q8GXJ1	-	-

.

Gene expression

.

.

Personal Data