Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Gene families
Literature
Plant Compara
Pan-taxonomic Compara
- Gene Tree
- Orthologues
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

Configure this page

Export data

Share this page

Bookmark this page

Ensembl Plants is produced in collaboration with Gramene

.

Gene: AT2G16900

.

Description

phospholipase-like protein (PEARLI 4) family protein [Source:NCBI gene (formerly Entrezgene);Acc:816192]

Gene Synonyms

F12A24.8, F12A24_8

Location

Chromosome 2: 7,323,570-7,326,317 reverse strand.

About this gene

This gene has 7 transcripts (splice variants), 97 orthologues and 1 paralogue.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Biotype	UniProt	RefSeq	Flags
AT2G16900-203	AT2G16900.6	2252	382aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9ZVX3	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
AT2G16900-201	AT2G16900.4	2030	293aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A8MRF0	-	-
AT2G16900-204	AT2G16900.7	1990	293aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A8MRF0	-	-
AT2G16900-206	AT2G16900.3	1964	293aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A8MRF0	-	-
AT2G16900-202	AT2G16900.5	1932	382aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9ZVX3	-	-
AT2G16900-205	AT2G16900.1	1860	382aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9ZVX3	-	-
AT2G16900-207	AT2G16900.2	1255	293aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A8MRF0	-	-

.

Paralogues

.

Download paralogues

Type	Ancestral taxonomy	Ensembl identifier & gene name	Compare	Location	Percentage of the paralogous sequence matching the query sequenceTarget %id	Percentage of the query sequence matching the sequence of the paralogueQuery %id
Genes (homologues) that have evolved by duplication.Paralogues	Last common ancestor with BrassicaMustard family (Brassicaceae)	AT4G35110 AT4G35110 phospholipase-like protein (PEARLI 4) family protein [Source:NCBI gene (formerly Entrezgene);Acc:829663]	Region Comparison Alignment (protein) Alignment (cDNA)	4:16,712,280-16,715,114:-1	57.36 %	60.21 %

.

Personal Data