A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
Click on 'Show details' to display the orthologues for one or more groups of species. Alternatively, click on 'Configure this page' to choose a custom list of species.
Species set
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Number of species with 1:1 orthologues<em>A type of orthologue assigned for a pair of species where only one copy is found in each species.</em>With 1:1 orthologues
Number of species with 1:many orthologues<em>A type of orthologue assigned for a pair of species where one gene in one species is orthologous to multiple genes in the other species, due to (a) duplication event(s) in the second species.</em>With 1:many orthologues
Number of species with many:many orthologues<em>A type of orthologue assigned for a pair of species where multiple orthologues are found in both species, where the duplication events in both species occurred after the speciation event.</em>With many:many orthologues
Number of species without orthologuesWithout orthologues
Percentage of the orthologous sequence matching the Arabidopsis thaliana sequenceTarget %id
Percentage of the Arabidopsis thaliana sequence matching the sequence of the orthologueQuery %id
<a href='/info/genome/compara/Ortholog_qc_manual.html#goc'>Gene Order Conservation Score (values are 0-100)</a>GOC Score
<a href='/info/genome/compara/Ortholog_qc_manual.html#wga'>Whole Genome Alignment Coverage (values are 0-100)</a>WGA Coverage
<a href='/info/genome/compara/Ortholog_qc_manual.html#hc'>Homology with high %identity and high GOC score or WGA coverage (as available), Yes or No.</a>High Confidence
Marchantia polymorpha
A type of orthologue assigned for a pair of species where one gene in one species is orthologous to multiple genes in the other species, due to (a) duplication event(s) in the second species.1-to-many
A type of orthologue assigned for a pair of species where multiple orthologues are found in both species, where the duplication events in both species occurred after the speciation event.Many-to-many
A type of orthologue assigned for a pair of species where multiple orthologues are found in both species, where the duplication events in both species occurred after the speciation event.Many-to-many
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