Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Gene families
Literature
Plant Compara
Pan-taxonomic Compara
- Gene Tree
- Orthologues
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Ensembl Plants is produced in collaboration with Gramene

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Gene: AT1G56500

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Description

haloacid dehalogenase-like hydrolase family protein [Source:NCBI gene (formerly Entrezgene);Acc:842103]

Gene Synonyms

AT1G56505, F13N6.21, F13N6_21, SOQ1, suppressor of quenching 1

Location

Chromosome 1: 21,159,736-21,167,341 forward strand.

About this gene

This gene has 3 transcripts (splice variants), 147 orthologues and 8 paralogues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Biotype	UniProt	RefSeq	Flags
AT1G56500-203	AT1G56500.1	3448	1055aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q8VZ10	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
AT1G56500-202	AT1G56500.3	3526	853aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-	-
AT1G56500-201	AT1G56500.2	3514	878aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-	-

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Plant Compara

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Genomic alignments

Gene tree

Orthologues

Paralogues

Families (Not available)

More views of comparative genomics data, such as multiple alignments and synteny, are available on the Location page for this gene.

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Personal Data