What's New in Release 36
- Updated genomes
- New assembly and annotation for Hordeum vulgare (barley)
- New data
- Updated data
- Updated variation data for Arabidopsis thaliana, incorporating the full data set from the 1001 Genomes Project.
- Updated peptide comparative genomics including updated barley
- Updated protein features using InterProScan with version 63 of InterPro (new sources added: CDD, MobiDB, SFLD)
- Updated BioMart
Release 37 of Ensembl Genomes is scheduled for 22nd August 2017. For more details, see the release intentions.
Register now for the EBI training course in Plant and Pathogen Bioinformatics 13th-15th November 2017, Hinxton, UK
This course will provide an introduction to data resources, tools and essential bioinformatic techniques for biologists studying plants and their pathogens. It will be delivered using a mixture of lectures, practical computer sessions and include discussions based on relevant case studies and public domain data. For more details, go to http://www.ebi.ac.uk/training/events/2017/plant-and-pathogen-bioinformatics-0.
New barley genome
A ten-nation consortium has reported the first high-quality reference genome sequence of Hordeum vulgare (barley). The barley genome was sequenced and assembled using an array of state-of- the-art methods, taking ten years. For the first time, scientists can now locate all genes precisely in the genome and analyze complex gene families that play a key role in malting and resilience.
New Arabidopsis variation data from the 1001 Genomes Project
We have upgraded our representation of genetic variation in Arabidopsis thaliana, incorporating the full data set from the 1001 Genomes Project, covering more than 10 million variant loci across 1,135 samples (Cell 2016).
New bread wheat variation data
A total of 80,829 variation markers from the iSelect 90k array and 13.8 million Inter-Homoeologous Variants (IHVs) have been added to the new genome assembly of Triticum aestivum cv. Chinese Spring produced by the Earlham Institute.
This data is viewable alongside the existing Axiom 35k and 820k SNP marker sets provided by CerealsDB and located on the new assembly and the publicly available EMS mutant lines from tetraploid (cv. Kronos) and hexaploid (cv. Cadenza) TILLING populations (read more).
Ensembl Plants Archive Site
Alongside release 32 we have launched a new archive site, where we will keep selected previous releases of Ensembl Plants publicly available. The first release available on the archive site is release 31, and includes the previous assemblies for wheat and maize.
Ensembl Plants datasets are constructed in a direct collaboration with the Gramene resource, funded by the United States National Science Foundation award #1127112. Read more about our collaboration with Gramene.
The development of resources for wheat is funded by the BBSRC-funded Designing Future Wheat ISP.