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Medicago truncatula vs Lablab purpureus Natoba Synteny results

The syntenic regions between Medicago truncatula (Medicago truncatula, MtrunA17r5.0_ANR) and Lablab purpureus Natoba (Lablab purpureus, ILRI_Lpur) were extracted from their pairwise alignment in Ensembl Plants release 115. We look for stretches where the alignment blocks are in synteny. The search is run in two phases. In the first one, syntenic alignments that are closer than 200 kbp are grouped. In the second phase, the groups that are in synteny are linked provided that no more than 2 non-syntenic groups are found between them and they are less than 3Mbp apart.

Configuration parameters

No configuration parameters are available.

Statistics over 88 synteny blocks

Genome coverage (bp) Coding exon coverage (bp)
Medicago truncatula

Uncovered: 204,888,232 out of 429,196,467
Covered: 224,308,235 out of 429,196,467

Uncovered: 17,288,889 out of 45,081,035
Covered: 27,792,146 out of 45,081,035
Lablab purpureus Natoba

Uncovered: 235,811,698 out of 426,257,348
Covered: 190,445,650 out of 426,257,348

Uncovered: 11,073,132 out of 32,180,237
Covered: 21,107,105 out of 32,180,237