Triticum turgidum vs Triticum aestivum Synteny results
The syntenic regions between Triticum turgidum (Triticum turgidum subsp. durum, Svevo.v1) and Triticum aestivum (Triticum aestivum, IWGSC) were extracted from their pairwise alignment in Ensembl Plants release 100. We look for stretches where the alignment blocks are in synteny. The search is run in two phases. In the first one, syntenic alignments that are closer than 200 kbp are grouped. In the second phase, the groups that are in synteny are linked provided that no more than 2 non-syntenic groups are found between them and they are less than 3Mbp apart.
No configuration parameters are available.
Statistics over 782 synteny blocks
|Genome coverage (bp)||Coding exon coverage (bp)|
Uncovered: 1,453,140,865 out of 10,463,058,104
Uncovered: 11,717,656 out of 88,577,667
Uncovered: 5,456,462,544 out of 14,547,261,565
Uncovered: 55,182,246 out of 133,674,966