Triticum dicoccoides vs Aegilops tauschii Synteny results

The syntenic regions between Triticum dicoccoides (Triticum dicoccoides, WEWSeq_v.1.0) and Aegilops tauschii (Aegilops tauschii subsp. strangulata, Aet_v4.0) were extracted from their pairwise alignment in Ensembl Plants release 95. We look for stretches where the alignment blocks are in synteny. The search is run in two phases. In the first one, syntenic alignments that are closer than 200 kbp are grouped. In the second phase, the groups that are in synteny are linked provided that no more than 2 non-syntenic groups are found between them and they are less than 3Mbp apart.

Configuration parameters

No configuration parameters are available.

Statistics over 1,104 synteny blocks