Zea mays vs Sorghum bicolor Synteny results
The syntenic regions between Zea mays (Zea mays, Zm-B73-REFERENCE-NAM-5.0) and Sorghum bicolor (Sorghum bicolor, Sorghum_bicolor_NCBIv3) were extracted from their pairwise alignment in Ensembl Plants release 105. We look for stretches where the alignment blocks are in synteny. The search is run in two phases. In the first one, syntenic alignments that are closer than 200 kbp are grouped. In the second phase, the groups that are in synteny are linked provided that no more than 2 non-syntenic groups are found between them and they are less than 3Mbp apart.
No configuration parameters are available.
Statistics over 214 synteny blocks
|Genome coverage (bp)||Coding exon coverage (bp)|
Uncovered: 1,403,685,322 out of 2,182,075,994
Uncovered: 21,032,375 out of 43,681,835
Uncovered: 421,205,697 out of 708,735,318
Uncovered: 8,997,590 out of 39,785,927