Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Gene families
Literature
Plant Compara
Pan-taxonomic Compara
- Gene Tree
- Orthologues
Ontologies
- GO: Biological process
- GO: Molecular function
- GO: Cellular component
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Ensembl Plants is produced in collaboration with Gramene

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Gene: Pp3c25_2420

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Location

Chromosome 25: 1,560,104-1,565,898 reverse strand.

About this gene

This gene has 16 transcripts (splice variants), 211 orthologues and 13 paralogues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	Flags
-	Pp3c25_2420V3.4	4764	825aa	Pp3c25_2420V3.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
-	Pp3c25_2420V3.13	4398	825aa	Pp3c25_2420V3.13	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
-	Pp3c25_2420V3.12	3925	825aa	Pp3c25_2420V3.12	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
-	Pp3c25_2420V3.11	3893	825aa	Pp3c25_2420V3.11	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A9THQ8	-
-	Pp3c25_2420V3.16	3889	813aa	Pp3c25_2420V3.16	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
-	Pp3c25_2420V3.3	3805	785aa	Pp3c25_2420V3.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2K1IDI5	-
-	Pp3c25_2420V3.15	3788	813aa	Pp3c25_2420V3.15	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
-	Pp3c25_2420V3.9	3746	674aa	Pp3c25_2420V3.9	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
-	Pp3c25_2420V3.2	3708	785aa	Pp3c25_2420V3.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2K1IDI5	-
-	Pp3c25_2420V3.10	3702	825aa	Pp3c25_2420V3.10	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
-	Pp3c25_2420V3.14	3635	813aa	Pp3c25_2420V3.14	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
-	Pp3c25_2420V3.1	3552	785aa	Pp3c25_2420V3.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2K1IDI5	-
-	Pp3c25_2420V3.8	3347	615aa	Pp3c25_2420V3.8	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
-	Pp3c25_2420V3.7	3233	615aa	Pp3c25_2420V3.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
-	Pp3c25_2420V3.5	3227	575aa	Pp3c25_2420V3.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
-	Pp3c25_2420V3.6	3113	575aa	Pp3c25_2420V3.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A9TAK0	-

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Summary

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