Summary
Sequence
Protein Information
- Protein summary
- Domains & features
- Variants
- PDB 3D protein model
- AlphaFold predicted model
Genetic Variation
- Variant table
- Variant image
- Population comparison
- Comparison image
External References
- General identifiers
- Oligo probes
Supporting evidence
ID History
- Transcript history
- Protein history

Configure this page

Transcript: AT5G16720.1 AT5G16720-201

Description

caldesmon-like protein (Protein of unknown function, DUF593) [Source:NCBI gene (formerly Entrezgene);Acc:831534]

Location

About this transcript

This transcript has 3 exons, is annotated with 25 domains and features and is associated with 216 variant alleles.

Gene

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
AT5G16720-201	AT5G16720.1	2393	675aa	AT5G16720.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A178UCL7 Q0WNW4	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,

Summary

Statistics

Exons: 3, Coding exons: 3, Transcript length: 2,393 bps, Translation length: 675 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q0WNW4

Version

AT5G16720.1

Type

Protein coding

Annotation Method

Gene annotation by ARAPORT through a process of automatic and manual curation.