Summary
Sequence
Protein Information
- Protein summary
- Domains & features
- Variants
- PDB 3D protein model
- AlphaFold predicted model
Genetic Variation
- Variant table
- Variant image
- Population comparison
- Comparison image
External References
- General identifiers
- Oligo probes
Supporting evidence
ID History
- Transcript history
- Protein history

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Transcript: AT3G23290.2 LSH4-201

Description

LIGHT-DEPENDENT SHORT HYPOCOTYLS-like protein (DUF640) [Source:NCBI gene (formerly Entrezgene);Acc:821908]

Location

About this transcript

This transcript has 2 exons, is annotated with 11 domains and features and is associated with 265 variant alleles.

Gene

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
LSH4-201	AT3G23290.2	1465	195aa	AT3G23290.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A178VHD2 Q9LW68	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,

Summary

Statistics

Exons: 2, Coding exons: 2, Transcript length: 1,465 bps, Translation length: 195 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q9LW68

Version

AT3G23290.2

Type

Protein coding

Annotation Method

Gene annotation by ARAPORT through a process of automatic and manual curation.