Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Gene families
Literature
Plant Compara
Pan-taxonomic Compara
- Gene Tree
- Orthologues
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Ensembl Plants is produced in collaboration with Gramene

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Gene: TOPP8 AT5G27840

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Description

Calcineurin-like metallo-phosphoesterase superfamily protein [Source:NCBI gene (formerly Entrezgene);Acc:832846]

Gene Synonyms

T1G16.170, T1G16_170

Location

Chromosome 5: 9,862,923-9,865,172 reverse strand.

About this gene

This gene has 4 transcripts (splice variants), 144 orthologues and 25 paralogues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
TOPP8-201	AT5G27840.4	1834	330aa	AT5G27840.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A1P8BC75	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
TOPP8-203	AT5G27840.3	1861	324aa	AT5G27840.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	O82734	-	-
TOPP8-202	AT5G27840.1	1689	318aa	AT5G27840.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A5S9Y7Y8	-	-
TOPP8-204	AT5G27840.2	1648	324aa	AT5G27840.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	O82734	-	-

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Summary

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