Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Gene families
Literature
Plant Compara
Pan-taxonomic Compara
- Gene Tree
- Orthologues
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

Configure this page

Share this page

Bookmark this page

Ensembl Plants is produced in collaboration with Gramene

.

Gene: AT5G04090

.

Description

histidine-tRNA ligase [Source:NCBI gene (formerly Entrezgene);Acc:830288]

Gene Synonyms

F21E1.10

Location

Chromosome 5: 1,105,352-1,108,282 reverse strand.

About this gene

This gene has 7 transcripts (splice variants), 230 orthologues and 13 paralogues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
AT5G04090-206	AT5G04090.6	1714	322aa	AT5G04090.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A178UIE7 A0A384LCX7	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
AT5G04090-202	AT5G04090.3	2033	264aa	AT5G04090.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F4KI54	-	-
AT5G04090-201	AT5G04090.4	2019	277aa	AT5G04090.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A1P8BDZ4	-	-
AT5G04090-204	AT5G04090.5	1752	264aa	AT5G04090.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F4KI54	-	-
AT5G04090-203	AT5G04090.1	1552	264aa	AT5G04090.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F4KI54	-	-
AT5G04090-207	AT5G04090.7	1470	277aa	AT5G04090.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A1P8BDZ4	-	-
AT5G04090-205	AT5G04090.2	1338	305aa	AT5G04090.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A178UGW3 Q66GM7	-	-

.

Summary

.

.