Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Gene families
Literature
Plant Compara
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
Pan-taxonomic Compara
- Gene Tree
- Orthologues
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Ensembl Plants is produced in collaboration with Gramene

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Gene: AT1G55000

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Description

peptidoglycan-binding LysM domain-containing protein [Source:NCBI gene (formerly Entrezgene);Acc:841942]

Gene Synonyms

F14C21.53, F14C21_53

Location

Chromosome 1: 20,514,634-20,516,558 forward strand.

About this gene

This gene has 3 transcripts (splice variants) and 138 orthologues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
AT1G55000-201	AT1G55000.1	1186	221aa	AT1G55000.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A178W626 Q9FZ32	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
AT1G55000-203	AT1G55000.2	1055	221aa	AT1G55000.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A178W626 Q9FZ32	-	-
AT1G55000-202	AT1G55000.3	1008	221aa	AT1G55000.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A178W626 Q9FZ32	-	-

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Summary

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