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Ensembl Plants Species

KeySpecies V P G A

Provider | Scientific name | Taxonomy ID

V - has a variation database, P - is in pan-taxonomic compara, G - has whole genome DNA alignments, A - has other alignments

Liliopsida

Aegilops tauschiiAegilops tauschii G A
BGI | Aegilops tauschii | 37682
Oryza glaberrimaOryza glaberrima V G A
AGI | Oryza glaberrima | 4538
Oryza sativaOryza sativa Japonica (Rice) V P G
RAP-DB | Oryza sativa | 39947
Brachypodium distachyonBrachypodium distachyon V G A
Brachypodium.org | Brachypodium distachyon (L.) Beauv | 15368
Oryza glumaepatulaOryza glumaepatula G A
OGE | Oryza glumaepatula | 40148
Setaria italicaSetaria italica G A
JGI | Setaria italica | 4555
Hordeum vulgareHordeum vulgare V G A
IBSC | Hordeum vulgare | 112509
Oryza meridionalisOryza meridionalis G A
OGE | Oryza meridionalis | 40149
Sorghum bicolorSorghum bicolor V G A
JGI | Sorghum bicolor BTX623 | 4558
Musa acuminataMusa acuminata G
CIRAD | Musa acuminata Doubled-haploid Pahang (DH-Pahang) | 214687
Oryza nivaraOryza nivara G A
OGE | Oryza nivara | 4536
Triticum aestivumTriticum aestivum G A
IWGSP1 | Triticum aestivum Chinese Spring | 4565
Oryza barthiiOryza barthii G A
OGE | Oryza barthii | 65489
Oryza punctataOryza punctata G A
OGE | Oryza punctata | 4537
Triticum urartuTriticum urartu G A
BGI | Triticum urartu | 4572
Oryza brachyanthaOryza brachyantha G A
OGE | Oryza brachyantha | 4533
Oryza indicaOryza sativa Indica Group V G A
RIS | Oryza indica 93-11 (Indica rice) | 39946
Zea maysZea mays V G A
MaizeSequence.org | Zea mays | 4577

eudicotyledons

Arabidopsis lyrataArabidopsis lyrata G A
JGI | Arabidopsis lyrata | 81972
Medicago truncatulaMedicago truncatula G A
IMGAG | Medicago truncatula A17 | 3880
Solanum tuberosumSolanum tuberosum G A
PGSC | Solanum tuberosum | 4113
Arabidopsis thalianaArabidopsis thaliana V P G A
TAIR | Arabidopsis thaliana | 3702
Populus trichocarpaPopulus trichocarpa G A
JGI | Populus trichocarpa | 3694
Vitis viniferaVitis vinifera V P G A
Genoscope | Vitis vinifera | 29760
Brassica rapaBrassica rapa G A
IVFCAAS | Brassica rapa | 51351
Prunus persicaPrunus persica G A
International Peach Genome Initiative | Prunus persica | 3760
Glycine maxGlycine max G A
JGI | Glycine max | 3847
Solanum lycopersicumSolanum lycopersicum P G A
ITGSP | Solanum lycopersicum | 4081

Lycopodiophyta

Selaginella moellendorffiiSelaginella moellendorffii G A
European Nucleotide Archive  JGI   | Selaginella moellendorffii | 88036
    

Bryophyta

Physcomitrella patensPhyscomitrella patens P G A
JGI | Physcomitrella patens | 145481
    

Chlorophyta

Chlamydomonas reinhardtiiChlamydomonas reinhardtii P G A
JGI | Chlamydomonas reinhardtii | 3055
    

Rhodophyta

Cyanidioschyzon merolaeCyanidioschyzon merolae P G
European Nucleotide Archive  Cyanidioschyzon merolae Genome Project   | Cyanidioschyzon merolae | 280699
    

Amborellales

Amborella trichopodaAmborella trichopoda P G
Amborella Genome Database | Amborella trichopoda | 13333