Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Gene families
Literature
Plant Compara
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
Pan-taxonomic Compara
- Gene Tree
- Orthologues
Ontologies
- GO: Molecular function
- GO: Cellular component
- GO: Biological process
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Ensembl Plants is produced in collaboration with Gramene

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Gene: VPS22 AT4G27040

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Description

EAP30/Vps36 family protein [Source:NCBI gene (formerly Entrezgene);Acc:828812]

Gene Synonyms

F10M23.380, F10M23_380

Location

Chromosome 4: 13,572,885-13,575,639 reverse strand.

About this gene

This gene has 6 transcripts (splice variants) and 150 orthologues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
VPS22-206	AT4G27040.5	1620	250aa	AT4G27040.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A178V291 Q5M759	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
VPS22-202	AT4G27040.2	1618	250aa	AT4G27040.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A178V291 Q5M759	-	-
VPS22-205	AT4G27040.6	1600	250aa	AT4G27040.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A178V291 Q5M759	-	-
VPS22-204	AT4G27040.1	1581	250aa	AT4G27040.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A178V291 Q5M759	-	-
VPS22-203	AT4G27040.4	1530	250aa	AT4G27040.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A178V291 Q5M759	-	-
VPS22-201	AT4G27040.3	1431	250aa	AT4G27040.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A178V291 Q5M759	-	-

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Summary

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