Transcript: Zm00001eb427300_T001 SALR_5-202

Location

Chromosome 10: 135,133,720-135,135,542 reverse strand.

About this transcript

This transcript has 5 exons, is annotated with 9 domains and features and is associated with 844 variant alleles.

Gene

This transcript is a product of gene Zm00001eb427300 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
SALR_5-201	Zm00001eb427300_T003	1342	312aa	Zm00001eb427300_P003	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A804RN66	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
SALR_5-202	Zm00001eb427300_T001	1371	188aa	Zm00001eb427300_P001	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A804RLB8	-	-
SALR_5-203	Zm00001eb427300_T002	1339	311aa	Zm00001eb427300_P002	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8J8Y2U0 C4J662	-	-

Summary

Statistics

Exons: 5, Coding exons: 2, Transcript length: 1,371 bps, Translation length: 188 residues

Version

Zm00001eb427300_T001

Type

Protein coding

Annotation Method

Gene annotations from the CSHL gene annotation pipeline developed under NAM project. It is performed through an automated, evidence-based method combining 3rd party software including Mikado, BRAKER and PASA. Further filtered by conservation and AED score, classified into coding and non-coding sets.

Transcript: Zm00001eb427300_T001 SALR_5-202

Summary

About Us

Get help

Our sister sites

Follow us

Favourite species

All species

Recent locations

Transcript: Zm00001eb427300_T001 SALR_5-202

Summary

About Us

Get help

Our sister sites

Follow us