Transcript: Zm00001eb411140_T002

Description

Zm00001e039775

Location

Chromosome 10: 31,491,480-31,498,285 reverse strand.

About this transcript

This transcript has 7 exons, is annotated with 15 domains and features, is associated with 1040 variant alleles and maps to 44 oligo probes.

Gene

This transcript is a product of gene Zm00001eb411140 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
-	Zm00001eb411140_T003	4528	1197aa	Zm00001eb411140_P003	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A1D6IX13 A0A1D6IX14	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
-	Zm00001eb411140_T002	4478	1174aa	Zm00001eb411140_P002	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3L6G870 B8A2F7 K7UDH3	-	-
-	Zm00001eb411140_T001	4075	1174aa	Zm00001eb411140_P001	Gene/transcipt that contains an open reading frame (ORF).Protein coding	K7UDH3	-	-

Summary

Statistics

Exons: 7, Coding exons: 6, Transcript length: 4,478 bps, Translation length: 1,174 residues

Version

Zm00001eb411140_T002

Type

Protein coding

Annotation Method

Gene annotations from the CSHL gene annotation pipeline developed under NAM project. It is performed through an automated, evidence-based method combining 3rd party software including Mikado, BRAKER and PASA. Further filtered by conservation and AED score, classified into coding and non-coding sets.

Transcript: Zm00001eb411140_T002

Summary

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Transcript: Zm00001eb411140_T002

Summary

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