Transcript: Zm00001eb407180_T001

Description

Zm00001e039411

Location

Chromosome 10: 6,733,098-6,739,792 reverse strand.

About this transcript

This transcript has 13 exons, is annotated with 7 domains and features, is associated with 413 variant alleles and maps to 2 oligo probes.

Gene

This transcript is a product of gene Zm00001eb407180 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	Flags
-	Zm00001eb407180_T001	2404	399aa	Zm00001eb407180_P001	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
-	Zm00001eb407180_T002	2344	399aa	Zm00001eb407180_P002	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
-	Zm00001eb407180_T004	2203	399aa	Zm00001eb407180_P004	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
-	Zm00001eb407180_T003	2161	371aa	Zm00001eb407180_P003	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-

Summary

Statistics

Exons: 13, Coding exons: 9, Transcript length: 2,404 bps, Translation length: 399 residues

Version

Zm00001eb407180_T001

Type

Protein coding

Annotation Method

Gene annotations from the CSHL gene annotation pipeline developed under NAM project. It is performed through an automated, evidence-based method combining 3rd party software including Mikado, BRAKER and PASA. Further filtered by conservation and AED score, classified into coding and non-coding sets.

Transcript: Zm00001eb407180_T001

Summary

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Transcript: Zm00001eb407180_T001

Summary

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