Transcript: Zm00001eb403860_T002

Description

Zm00001e039057

Location

Chromosome 9: 160,329,593-160,330,771 reverse strand.

About this transcript

This transcript has 2 exons, is annotated with 16 domains and features, is associated with 947 variant alleles and maps to 27 oligo probes.

Gene

This transcript is a product of gene Zm00001eb403860 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
-	Zm00001eb403860_T004	1023	149aa	Zm00001eb403860_P004	Gene/transcipt that contains an open reading frame (ORF).Protein coding	C4J4M8	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
-	Zm00001eb403860_T002	818	149aa	Zm00001eb403860_P002	Gene/transcipt that contains an open reading frame (ORF).Protein coding	C4J4M8	-	-
-	Zm00001eb403860_T001	794	141aa	Zm00001eb403860_P001	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-	-
-	Zm00001eb403860_T003	761	130aa	Zm00001eb403860_P003	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-	-

Summary

Statistics

Exons: 2, Coding exons: 1, Transcript length: 818 bps, Translation length: 149 residues

Version

Zm00001eb403860_T002

Type

Protein coding

Annotation Method

Gene annotations from the CSHL gene annotation pipeline developed under NAM project. It is performed through an automated, evidence-based method combining 3rd party software including Mikado, BRAKER and PASA. Further filtered by conservation and AED score, classified into coding and non-coding sets.

Transcript: Zm00001eb403860_T002

Summary

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Transcript: Zm00001eb403860_T002

Summary

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