Transcript: Zm00001eb403590_T001

Description

Zm00001e039032

Location

Chromosome 9: 159,942,362-159,951,178 forward strand.

About this transcript

This transcript has 4 exons, is annotated with 8 domains and features, is associated with 393 variant alleles and maps to 4 oligo probes.

Gene

This transcript is a product of gene Zm00001eb403590 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
-	Zm00001eb403590_T001	750	114aa	Zm00001eb403590_P001	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3L6D953 B6T7D5 K7W3A1	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
-	Zm00001eb403590_T003	688	91aa	Zm00001eb403590_P003	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-	-
-	Zm00001eb403590_T002	579	99aa	Zm00001eb403590_P002	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A1D6PKR4 A0A1D6PKR7	-	-

Summary

Statistics

Exons: 4, Coding exons: 3, Transcript length: 750 bps, Translation length: 114 residues

Version

Zm00001eb403590_T001

Type

Protein coding

Annotation Method

Gene annotations from the CSHL gene annotation pipeline developed under NAM project. It is performed through an automated, evidence-based method combining 3rd party software including Mikado, BRAKER and PASA. Further filtered by conservation and AED score, classified into coding and non-coding sets.

Transcript: Zm00001eb403590_T001

Summary

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Transcript: Zm00001eb403590_T001

Summary

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