Transcript: Zm00001eb403170_T003

Description

Zm00001e038994

Location

Chromosome 9: 159,139,573-159,148,336 reverse strand.

About this transcript

This transcript has 13 exons, is annotated with 28 domains and features, is associated with 863 variant alleles and maps to 69 oligo probes.

Gene

This transcript is a product of gene Zm00001eb403170 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	Flags
-	Zm00001eb403170_T003	2095	534aa	Zm00001eb403170_P003	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A1D6KUM0 A0A1D6PK15 A0A1D6PK16 A0A1D6PK17 A0A1D6PK18 A0A1D6PK21 A0A3L6DHU8	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
-	Zm00001eb403170_T002	3203	315aa	Zm00001eb403170_P002	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A1D6PK31 B6UEZ9 K7VQB3	-
-	Zm00001eb403170_T001	1421	407aa	Zm00001eb403170_P001	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A1D6GQ70 A0A1D6PK18 A0A1D6PK29 C0P7L0 K7VLV8	-

Summary

Statistics

Exons: 13, Coding exons: 13, Transcript length: 2,095 bps, Translation length: 534 residues

Version

Zm00001eb403170_T003

Type

Protein coding

Annotation Method

Gene annotations from the CSHL gene annotation pipeline developed under NAM project. It is performed through an automated, evidence-based method combining 3rd party software including Mikado, BRAKER and PASA. Further filtered by conservation and AED score, classified into coding and non-coding sets.

Transcript: Zm00001eb403170_T003

Summary

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Transcript: Zm00001eb403170_T003

Summary

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