Transcript: Zm00001eb400730_T001

Description

Zm00001e038769

Location

Chromosome 9: 154,213,281-154,228,173 forward strand.

About this transcript

This transcript has 11 exons, is annotated with 16 domains and features, is associated with 506 variant alleles and maps to 25 oligo probes.

Gene

This transcript is a product of gene Zm00001eb400730 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
-	Zm00001eb400730_T002	1750	252aa	Zm00001eb400730_P002	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A1D6N0J7 A0A1D6N0J8 A0A1D6PI21 A0A1D6PI25 A0A3L6DCH2	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
-	Zm00001eb400730_T003	1721	232aa	Zm00001eb400730_P003	Gene/transcipt that contains an open reading frame (ORF).Protein coding	K7W229	-	-
-	Zm00001eb400730_T001	1690	232aa	Zm00001eb400730_P001	Gene/transcipt that contains an open reading frame (ORF).Protein coding	K7VGH3 K7W229	-	-

Summary

Statistics

Exons: 11, Coding exons: 7, Transcript length: 1,690 bps, Translation length: 232 residues

Version

Zm00001eb400730_T001

Type

Protein coding

Annotation Method

Gene annotations from the CSHL gene annotation pipeline developed under NAM project. It is performed through an automated, evidence-based method combining 3rd party software including Mikado, BRAKER and PASA. Further filtered by conservation and AED score, classified into coding and non-coding sets.

Transcript: Zm00001eb400730_T001

Summary

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Transcript: Zm00001eb400730_T001

Summary

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