Zea mays (Zm-B73-REFERENCE-NAM-5.0)
Description

Zm00001e038558

About this transcript

This transcript has 28 exons, is annotated with 34 domains and features, is associated with 559 variant alleles and maps to 68 oligo probes.

Gene
NameTranscript IDbpProteinTranslation IDBiotypeUniProtFlags
-Zm00001eb398420_T00141681129aaZm00001eb398420_P001
 
Protein coding
-Ensembl Canonical
-Zm00001eb398420_T00241651128aaZm00001eb398420_P002
 
Protein coding
A0A1D6PEK2 A0A1D6PEK8 A0A1D6PEM3
A0A1D6PEM6 A0A3L6DG61
-
-Zm00001eb398420_T00441421128aaZm00001eb398420_P004
 
Protein coding
A0A1D6PEK2 A0A3L6DG61 -
-Zm00001eb398420_T0034051944aaZm00001eb398420_P003
 
Protein coding
A0A1D6IZT7 A0A1D6IZW0 A0A1D6IZY8
A0A1D6PEJ6 A0A1D6PEL8 A0A3L6DP76
B4FGN0
-
-Zm00001eb398420_T00539391128aaZm00001eb398420_P005
 
Protein coding
A0A1D6PEK2 A0A3L6DG61 -
-Zm00001eb398420_T0063356774aaZm00001eb398420_P006
 
Protein coding
A0A1D6IZV8 A0A1D6IZW3 A0A1D6IZW5
A0A1D6IZW8
-
Statistics

Exons: 28, Coding exons: 25, Transcript length: 4,165 bps, Translation length: 1,128 residues

Version

Zm00001eb398420_T002

Type

Protein coding

Annotation Method

Gene annotations from the CSHL gene annotation pipeline developed under NAM project. It is performed through an automated, evidence-based method combining 3rd party software including Mikado, BRAKER and PASA. Further filtered by conservation and AED score, classified into coding and non-coding sets.