Transcript: Zm00001eb397140_T003

Description

Zm00001e038430

Location

Chromosome 9: 144,393,656-144,396,612 forward strand.

About this transcript

This transcript has 5 exons, is annotated with 15 domains and features, is associated with 809 variant alleles and maps to 2 oligo probes.

Gene

This transcript is a product of gene Zm00001eb397140 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	Flags
-	Zm00001eb397140_T001	1736	411aa	Zm00001eb397140_P001	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
-	Zm00001eb397140_T003	1927	324aa	Zm00001eb397140_P003	Gene/transcipt that contains an open reading frame (ORF).Protein coding	C0P3Q6	-
-	Zm00001eb397140_T002	1469	410aa	Zm00001eb397140_P002	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-

Summary

Statistics

Exons: 5, Coding exons: 5, Transcript length: 1,927 bps, Translation length: 324 residues

Version

Zm00001eb397140_T003

Type

Protein coding

Annotation Method

Gene annotations from the CSHL gene annotation pipeline developed under NAM project. It is performed through an automated, evidence-based method combining 3rd party software including Mikado, BRAKER and PASA. Further filtered by conservation and AED score, classified into coding and non-coding sets.

Transcript: Zm00001eb397140_T003

Summary

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Transcript: Zm00001eb397140_T003

Summary

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