Transcript: Zm00001eb385450_T002

Description

Zm00001e037305

Location

Chromosome 9: 88,025,117-88,033,900 reverse strand.

About this transcript

This transcript has 4 exons, is annotated with 23 domains and features, is associated with 561 variant alleles and maps to 32 oligo probes.

Gene

This transcript is a product of gene Zm00001eb385450 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	Flags
-	Zm00001eb385450_T003	2159	667aa	Zm00001eb385450_P003	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
-	Zm00001eb385450_T001	2659	646aa	Zm00001eb385450_P001	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3L6DEK8 B6TSV4 C0PBR1	-
-	Zm00001eb385450_T002	2501	617aa	Zm00001eb385450_P002	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B6U3Z2	-
-	Zm00001eb385450_T004	2013	619aa	Zm00001eb385450_P004	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-

Summary

Statistics

Exons: 4, Coding exons: 4, Transcript length: 2,501 bps, Translation length: 617 residues

Version

Zm00001eb385450_T002

Type

Protein coding

Annotation Method

Gene annotations from the CSHL gene annotation pipeline developed under NAM project. It is performed through an automated, evidence-based method combining 3rd party software including Mikado, BRAKER and PASA. Further filtered by conservation and AED score, classified into coding and non-coding sets.

Transcript: Zm00001eb385450_T002

Summary

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Transcript: Zm00001eb385450_T002

Summary

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