Transcript: Zm00001eb371830_T003

Description

Zm00001e036055

Location

Chromosome 9: 3,558,801-3,567,521 reverse strand.

About this transcript

This transcript has 10 exons, is annotated with 7 domains and features, is associated with 694 variant alleles and maps to 14 oligo probes.

Gene

This transcript is a product of gene Zm00001eb371830 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
-	Zm00001eb371830_T002	3275	587aa	Zm00001eb371830_P002	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A1D6LW11 A0A1D6NRC1 A0A1D6NRC3 A0A3L6DDR0 A0A3L6EA24	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
-	Zm00001eb371830_T003	3343	510aa	Zm00001eb371830_P003	Gene/transcipt that contains an open reading frame (ORF).Protein coding	K7VQD9	-	-
-	Zm00001eb371830_T001	3088	446aa	Zm00001eb371830_P001	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A1D6NRC6	-	-

Summary

Statistics

Exons: 10, Coding exons: 9, Transcript length: 3,343 bps, Translation length: 510 residues

Version

Zm00001eb371830_T003

Type

Protein coding

Annotation Method

Gene annotations from the CSHL gene annotation pipeline developed under NAM project. It is performed through an automated, evidence-based method combining 3rd party software including Mikado, BRAKER and PASA. Further filtered by conservation and AED score, classified into coding and non-coding sets.

Transcript: Zm00001eb371830_T003

Summary

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Transcript: Zm00001eb371830_T003

Summary

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