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Zea mays (Zm-B73-REFERENCE-NAM-5.0) ▼

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Transcript: Zm00001eb370580_T001

Description

Zm00001e144126

Location

Chromosome 8: 180,119,845-180,135,357 forward strand.

About this transcript

This transcript has 12 exons, is annotated with 14 domains and features, is associated with 1117 variant alleles and maps to 49 oligo probes.

Gene

This transcript is a product of gene Zm00001eb370580 Show transcript tableHide transcript table

NameTranscript IDbpProteinTranslation IDBiotypeUniProtRefSeqFlags
-Zm00001eb370580_T0041762425aaZm00001eb370580_P004
 
Protein coding
A0A1D6GB68 A0A1D6GB69 A0A1D6GB70
A0A1D6GB86 A0A3L6FKY5 B4FIK5
B6TTP9 		-Ensembl Canonical
-Zm00001eb370580_T0011752425aaZm00001eb370580_P001
 
Protein coding
B4FIK5 --
-Zm00001eb370580_T0051644425aaZm00001eb370580_P005
 
Protein coding
B4FIK5 --
-Zm00001eb370580_T0021641388aaZm00001eb370580_P002
 
Protein coding
A0A1D6GB92 A0A3L6DMJ9 B4FI16
--
-Zm00001eb370580_T0031194328aaZm00001eb370580_P003
 
Protein coding
A0A1D6GB71 A0A1D6GB72 A0A1D6GB78
A0A1D6GB81 		--

Summary

Statistics

Exons: 12, Coding exons: 11, Transcript length: 1,752 bps, Translation length: 425 residues

Version

Zm00001eb370580_T001

Type

Protein coding

Annotation Method

Gene annotations from the CSHL gene annotation pipeline developed under NAM project. It is performed through an automated, evidence-based method combining 3rd party software including Mikado, BRAKER and PASA. Further filtered by conservation and AED score, classified into coding and non-coding sets.