Transcript: Zm00001eb368810_T001

Description

Zm00001e028846

Location

Chromosome 8: 176,779,799-176,786,915 forward strand.

About this transcript

This transcript has 12 exons, is annotated with 8 domains and features, is associated with 1124 variant alleles and maps to 28 oligo probes.

Gene

This transcript is a product of gene Zm00001eb368810 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
-	Zm00001eb368810_T001	1579	350aa	Zm00001eb368810_P001	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A1D6G934 A0A1D6G935 A0A1D6G938 A0A1D6N859 A0A1D6N862 A0A1D6N864 A0A1D6N867 A0A3L6DUG5 A0A3L6FE34 B4G186	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
-	Zm00001eb368810_T002	2067	293aa	Zm00001eb368810_P002	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3L6DUG5 B4FBD0	-	-
-	Zm00001eb368810_T003	1436	350aa	Zm00001eb368810_P003	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B4G186	-	-

Summary

Statistics

Exons: 12, Coding exons: 11, Transcript length: 1,579 bps, Translation length: 350 residues

Version

Zm00001eb368810_T001

Type

Protein coding

Annotation Method

Gene annotations from the CSHL gene annotation pipeline developed under NAM project. It is performed through an automated, evidence-based method combining 3rd party software including Mikado, BRAKER and PASA. Further filtered by conservation and AED score, classified into coding and non-coding sets.

Transcript: Zm00001eb368810_T001

Summary

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Transcript: Zm00001eb368810_T001

Summary

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