Transcript: Zm00001eb357890_T004

Description

Zm00001e027843

Location

Chromosome 8: 145,843,160-145,847,702 forward strand.

About this transcript

This transcript has 6 exons, is annotated with 9 domains and features, is associated with 1052 variant alleles and maps to 62 oligo probes.

Gene

This transcript is a product of gene Zm00001eb357890 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
-	Zm00001eb357890_T003	1297	257aa	Zm00001eb357890_P003	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
-	Zm00001eb357890_T001	1469	230aa	Zm00001eb357890_P001	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3L6DR01 B6TQW3	-	-
-	Zm00001eb357890_T004	1466	229aa	Zm00001eb357890_P004	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-	-
-	Zm00001eb357890_T002	1463	228aa	Zm00001eb357890_P002	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-	-

Summary

Statistics

Exons: 6, Coding exons: 6, Transcript length: 1,466 bps, Translation length: 229 residues

Version

Zm00001eb357890_T004

Type

Protein coding

Annotation Method

Gene annotations from the CSHL gene annotation pipeline developed under NAM project. It is performed through an automated, evidence-based method combining 3rd party software including Mikado, BRAKER and PASA. Further filtered by conservation and AED score, classified into coding and non-coding sets.

Transcript: Zm00001eb357890_T004

Summary

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Transcript: Zm00001eb357890_T004

Summary

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