Transcript: Zm00001eb343580_T003

Description

Zm00001e026517

Location

Chromosome 8: 69,946,147-69,949,124 reverse strand.

About this transcript

This transcript has 7 exons, is annotated with 6 domains and features and is associated with 438 variant alleles.

Gene

This transcript is a product of gene Zm00001eb343580 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
-	Zm00001eb343580_T002	2427	594aa	Zm00001eb343580_P002	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A804QK22	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
-	Zm00001eb343580_T001	2292	549aa	Zm00001eb343580_P001	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B8A1S8	-	-
-	Zm00001eb343580_T003	2281	388aa	Zm00001eb343580_P003	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A1D6FJY6	-	-
-	Zm00001eb343580_T004	2224	422aa	Zm00001eb343580_P004	Gene/transcipt that contains an open reading frame (ORF).Protein coding	C0PJQ7	-	-

Summary

Statistics

Exons: 7, Coding exons: 5, Transcript length: 2,281 bps, Translation length: 388 residues

Version

Zm00001eb343580_T003

Type

Protein coding

Annotation Method

Gene annotations from the CSHL gene annotation pipeline developed under NAM project. It is performed through an automated, evidence-based method combining 3rd party software including Mikado, BRAKER and PASA. Further filtered by conservation and AED score, classified into coding and non-coding sets.

Transcript: Zm00001eb343580_T003

Summary

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Transcript: Zm00001eb343580_T003

Summary

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