Transcript: Zm00001eb296120_T001

Description

Zm00001e032452

Location

Chromosome 6: 176,477,256-176,483,315 forward strand.

About this transcript

This transcript has 14 exons, is annotated with 23 domains and features, is associated with 703 variant alleles and maps to 51 oligo probes.

Gene

This transcript is a product of gene Zm00001eb296120 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
-	Zm00001eb296120_T001	1982	510aa	Zm00001eb296120_P001	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A1D6FKF4 A0A1D6FKG0 A0A1D6MD06 A0A1D6MD07 A0A1D6MD15 A0A3L6DUK6 A0A3L6EES6 B6T706 B6TSQ9 C0P3K6	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
-	Zm00001eb296120_T002	1954	510aa	Zm00001eb296120_P002	Gene/transcipt that contains an open reading frame (ORF).Protein coding	C0P3K6	-	-
-	Zm00001eb296120_T003	1925	382aa	Zm00001eb296120_P003	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-	-

Summary

Statistics

Exons: 14, Coding exons: 13, Transcript length: 1,982 bps, Translation length: 510 residues

Version

Zm00001eb296120_T001

Type

Protein coding

Annotation Method

Gene annotations from the CSHL gene annotation pipeline developed under NAM project. It is performed through an automated, evidence-based method combining 3rd party software including Mikado, BRAKER and PASA. Further filtered by conservation and AED score, classified into coding and non-coding sets.

Transcript: Zm00001eb296120_T001

Summary

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Transcript: Zm00001eb296120_T001

Summary

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