Transcript: Zm00001eb285210_T001

Description

Zm00001e031389

Location

Chromosome 6: 147,471,832-147,475,113 reverse strand.

About this transcript

This transcript has 3 exons, is annotated with 22 domains and features, is associated with 178 variant alleles and maps to 81 oligo probes.

Gene

This transcript is a product of gene Zm00001eb285210 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	Flags
-	Zm00001eb285210_T002	1852	447aa	Zm00001eb285210_P002	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0B4J3C2 Q9M7E5	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
-	Zm00001eb285210_T001	1875	399aa	Zm00001eb285210_P001	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
-	Zm00001eb285210_T003	1607	389aa	Zm00001eb285210_P003	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A1D6M1G2 A0A1D6M1N8 A0A3L6E7F0	-

Summary

Statistics

Exons: 3, Coding exons: 2, Transcript length: 1,875 bps, Translation length: 399 residues

Version

Zm00001eb285210_T001

Type

Protein coding

Annotation Method

Gene annotations from the CSHL gene annotation pipeline developed under NAM project. It is performed through an automated, evidence-based method combining 3rd party software including Mikado, BRAKER and PASA. Further filtered by conservation and AED score, classified into coding and non-coding sets.

Transcript: Zm00001eb285210_T001

Summary

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Transcript: Zm00001eb285210_T001

Summary

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