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Zea mays (Zm-B73-REFERENCE-NAM-5.0) ▼

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Transcript: Zm00001eb278500_T002

Description

Zm00001e030757

Location

Chromosome 6: 119,227,861-119,251,825 forward strand.

About this transcript

This transcript has 30 exons, is annotated with 11 domains and features, is associated with 947 variant alleles and maps to 100 oligo probes.

Gene

This transcript is a product of gene Zm00001eb278500 Show transcript tableHide transcript table

NameTranscript IDbpProteinTranslation IDBiotypeUniProtRefSeqFlags
-Zm00001eb278500_T00439061056aaZm00001eb278500_P004
 
Protein coding
A0A1D6LUB6 -Ensembl Canonical
-Zm00001eb278500_T00349611055aaZm00001eb278500_P003
 
Protein coding
A0A1D6LU42 A0A1D6LU45 A0A1D6LU51
A0A1D6LU52 A0A1D6LU56 A0A1D6LU68
A0A1D6LU77 A0A1D6LU79 A0A1D6LU80
A0A1D6LU85 A0A3L6E9D0 		--
-Zm00001eb278500_T00248371055aaZm00001eb278500_P002
 
Protein coding
A0A1D6LU42 --
-Zm00001eb278500_T00148061055aaZm00001eb278500_P001
 
Protein coding
A0A1D6LU42 --
-Zm00001eb278500_T00539031056aaZm00001eb278500_P005
 
Protein coding
A0A1D6LU67 A0A1D6LU69 A0A1D6LU90
A0A1D6LUB6 		--

Summary

Statistics

Exons: 30, Coding exons: 28, Transcript length: 4,837 bps, Translation length: 1,055 residues

Version

Zm00001eb278500_T002

Type

Protein coding

Annotation Method

Gene annotations from the CSHL gene annotation pipeline developed under NAM project. It is performed through an automated, evidence-based method combining 3rd party software including Mikado, BRAKER and PASA. Further filtered by conservation and AED score, classified into coding and non-coding sets.