Transcript: Zm00001eb270300_T004

Description

Zm00001e029976

Location

Chromosome 6: 79,881,059-79,883,216 reverse strand.

About this transcript

This transcript has 7 exons, is annotated with 12 domains and features, is associated with 566 variant alleles and maps to 45 oligo probes.

Gene

This transcript is a product of gene Zm00001eb270300 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
-	Zm00001eb270300_T002	1847	358aa	Zm00001eb270300_P002	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3L6EDD9 B4FN13 C0PAS1	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
-	Zm00001eb270300_T001	1984	270aa	Zm00001eb270300_P001	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-	-
-	Zm00001eb270300_T004	1197	209aa	Zm00001eb270300_P004	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-	-
-	Zm00001eb270300_T003	819	192aa	Zm00001eb270300_P003	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-	-

Summary

Statistics

Exons: 7, Coding exons: 5, Transcript length: 1,197 bps, Translation length: 209 residues

Version

Zm00001eb270300_T004

Type

Protein coding

Annotation Method

Gene annotations from the CSHL gene annotation pipeline developed under NAM project. It is performed through an automated, evidence-based method combining 3rd party software including Mikado, BRAKER and PASA. Further filtered by conservation and AED score, classified into coding and non-coding sets.

Transcript: Zm00001eb270300_T004

Summary

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Transcript: Zm00001eb270300_T004

Summary

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