Transcript: Zm00001eb263160_T002

Description

Zm00001e029372

Location

Chromosome 6: 20,726,795-20,735,703 reverse strand.

About this transcript

This transcript has 3 exons, is annotated with 7 domains and features, is associated with 118 variant alleles and maps to 32 oligo probes.

Gene

This transcript is a product of gene Zm00001eb263160 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	Flags
-	Zm00001eb263160_T003	3610	636aa	Zm00001eb263160_P003	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A1D6LGC2 A0A1D6LGC3 B6SXL3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
-	Zm00001eb263160_T001	2299	598aa	Zm00001eb263160_P001	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A1D6LGC7 C0HIH1 C0PFS7	-
-	Zm00001eb263160_T002	2001	600aa	Zm00001eb263160_P002	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A1D6LGC6	-

Summary

Statistics

Exons: 3, Coding exons: 2, Transcript length: 2,001 bps, Translation length: 600 residues

Version

Zm00001eb263160_T002

Type

Protein coding

Annotation Method

Gene annotations from the CSHL gene annotation pipeline developed under NAM project. It is performed through an automated, evidence-based method combining 3rd party software including Mikado, BRAKER and PASA. Further filtered by conservation and AED score, classified into coding and non-coding sets.

Transcript: Zm00001eb263160_T002

Summary

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Transcript: Zm00001eb263160_T002

Summary

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