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Zea mays (Zm-B73-REFERENCE-NAM-5.0) ▼

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Transcript: Zm00001eb259400_T005

Description

Zm00001e016277

Location

Chromosome 5: 225,074,671-225,079,150 reverse strand.

About this transcript

This transcript has 11 exons, is annotated with 8 domains and features, is associated with 440 variant alleles and maps to 45 oligo probes.

Gene

This transcript is a product of gene Zm00001eb259400 Show transcript tableHide transcript table

NameTranscript IDbpProteinTranslation IDBiotypeUniProtRefSeqFlags
-Zm00001eb259400_T0011996497aaZm00001eb259400_P001
 
Protein coding
A0A1D6HQ66 A0A1D6HQ68 A0A3L6ES04
B6U7R3 		-Ensembl Canonical
-Zm00001eb259400_T0052084370aaZm00001eb259400_P005
 
Protein coding
A0A1D6HQ72 C0PMH0 --
-Zm00001eb259400_T0032080475aaZm00001eb259400_P003
 
Protein coding
---
-Zm00001eb259400_T0061967351aaZm00001eb259400_P006
 
Protein coding
---
-Zm00001eb259400_T0041962489aaZm00001eb259400_P004
 
Protein coding
A0A1D6HQ73 --
-Zm00001eb259400_T0021938373aaZm00001eb259400_P002
 
Protein coding
A0A1D6HQ70 A0A1D6HQ71 C0HGQ8
--
-Zm00001eb259400_T0071693370aaZm00001eb259400_P007
 
Protein coding
A0A1D6HQ72 --

Summary

Statistics

Exons: 11, Coding exons: 9, Transcript length: 2,084 bps, Translation length: 370 residues

Version

Zm00001eb259400_T005

Type

Protein coding

Annotation Method

Gene annotations from the CSHL gene annotation pipeline developed under NAM project. It is performed through an automated, evidence-based method combining 3rd party software including Mikado, BRAKER and PASA. Further filtered by conservation and AED score, classified into coding and non-coding sets.