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Zea mays (Zm-B73-REFERENCE-NAM-5.0) ▼

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Transcript: Zm00001eb259400_T001

Description

Zm00001e016277

Location

Chromosome 5: 225,074,658-225,079,150 reverse strand.

About this transcript

This transcript has 12 exons, is annotated with 10 domains and features, is associated with 440 variant alleles and maps to 43 oligo probes.

Gene

This transcript is a product of gene Zm00001eb259400 Show transcript tableHide transcript table

NameTranscript IDbpProteinTranslation IDBiotypeUniProtRefSeqFlags
-Zm00001eb259400_T0011996497aaZm00001eb259400_P001
 
Protein coding
A0A1D6HQ66 A0A1D6HQ68 A0A3L6ES04
B6U7R3 		-Ensembl Canonical
-Zm00001eb259400_T0052084370aaZm00001eb259400_P005
 
Protein coding
A0A1D6HQ72 C0PMH0 --
-Zm00001eb259400_T0032080475aaZm00001eb259400_P003
 
Protein coding
---
-Zm00001eb259400_T0061967351aaZm00001eb259400_P006
 
Protein coding
---
-Zm00001eb259400_T0041962489aaZm00001eb259400_P004
 
Protein coding
A0A1D6HQ73 --
-Zm00001eb259400_T0021938373aaZm00001eb259400_P002
 
Protein coding
A0A1D6HQ70 A0A1D6HQ71 C0HGQ8
--
-Zm00001eb259400_T0071693370aaZm00001eb259400_P007
 
Protein coding
A0A1D6HQ72 --

Summary

Statistics

Exons: 12, Coding exons: 12, Transcript length: 1,996 bps, Translation length: 497 residues

Version

Zm00001eb259400_T001

Type

Protein coding

Annotation Method

Gene annotations from the CSHL gene annotation pipeline developed under NAM project. It is performed through an automated, evidence-based method combining 3rd party software including Mikado, BRAKER and PASA. Further filtered by conservation and AED score, classified into coding and non-coding sets.